NMRduino is an affordable magnetic resonance prototyping and learning tool.
Join the “Open Hardware in Imaging” special Virtual Pub edition organized by Euro-BioImaging with highlights of a number of open hardware projects in biological and biomedical imaging. If willing to share your developments, please, submit your abstract before the 14th of July!
An RF coil system consisting of an 8-channel transmit (Tx) and 8-channel receive (Rx) coil arrays for 19F MRI
An automated and flexible algorithm for rapid prototyping of new MR gradient and shim coil designs.
An open-source 3d printed antenna set for MRI Faraday RF cages attenuation measurements.
A Python toolbox that aims to make it easier for psychologists and neuroscientists to do “deep learning” analyses on their neuroimaging data
Virtual Scanner is an end-to-end hybrid Magnetic Resonance Imaging (MRI) simulator/console designed to be zero-footprint, modular, and supported by open-source standards.
Modular phantom and corresponding software tools to measure distortion in MRI systems
Yarra is a simple and open software framework for Siemens MRI systems to facilitate data transfer for offline processing of computationally expensive algorithms.
An affordable biomedical imaging system that allows to create images based on the electrical properties of tissues.
Hardware and software designs that enable performing Nuclear Magnetic Resonance experiments using the Earth’s magnetic field.
Python-based and UI-based pulse sequence design.
A MatLab ROI-based analysis suite for multiecho MRI data. AnalyzeNNLS creates a T2 distribution from the averaged decay data.
A collection of software tools developed to support clinical neuromodeling, particularly computational psychiatry, computational neurology, and computational psychosomatics.
A 3D Scanner based on structured light and stereo vision.
A software for computational neuroanatomy with focus on diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for denoising, registration, reconstruction, tracking, clustering, visualization, and statistical analysis of MRI data.
OpenICE is an initiative to create a community implementation of an Integrated Clinical Environment. The initiative encompasses not only software implementation but also an architecture for a wider clinical ecosystem to enable new avenues of clinical research. OpenICE seeks to integrate an inclusive…
Oscilloscope, Waveform Generator, Spectrum Analyzer, Logic Analyzer and Pattern Generator in one device.
Spinal Cord Toolbox is a comprehensive software for the processing and analysis of multiparametric MRI data of the spinal cord.
The scanner design is a low-cost resource for demonstrating concepts like magnetic resonance, spatial encoding, and the Fourier transform in an educational setting. A significant part of the system design is open-source.
An open-source software for quantitative MR image analysis.
A diffusion model-free framework with echo time dependence for free-water elimination and brain tissue microstructure characterization.
Direct signal control provides reduced transmision field inhomogeneity allowing to recover regions of low signal without increasing imaging time or interecho spacing.
This toolbox optimizes the acquisition protocols for spoiled gradient echo qMT sensitivity against noise and also sensitivity-regularization for robustness of a qMT parameter-of-interest.
A high dynamic range image processing algorithm which can offer enhanced contrast and feature preservation for multichannel and multisequence MRI.
This program allows to calculate the ultimate intrinsic SNR at the center of a uniform dielectric sphere, which may be used, for example, as an absolute reference to assess the performance of head coils with spherical phantoms.
This project proposes a hybrid system based on a single‐element ultrasound transducer and an MR scanner to help boost temporal resolution in real‐time MRI.
A user friendly software environment for implementing MRI pulse sequences and, exporting them to actual MRI scanners.
An MRI compatible phantom that simulates the respiration of a human subject in an automated way. A pressure probe is used in order to communicate in continuous time to Matlab the evolution of the respiratory cycle of the subject.
TOPPE is a simple, modular framework for rapid prototyping of pulse sequences on General Electric MRI scanners.
Advanced toolbox for design and analysis of radiofrequency (RF) pulses, and processing of magnetic resonance spectroscopy data.
Let’s have some food and drinks together in Barcelona.
Open Spin Microscopy is an open-source platform to build digital Scanning Light Sheet Microscopes (SPIM/DSLM/OPT).
The International Society for Magnetic Resonance in Medicine gave a warm welcome to OpenSourceImaging.org in its 25th annual meeting held in Hawaii (ISMRM 2017). The initiative raised interest through the two presentations and the two study group sessions offered by Lukas Winter. The next congress…
Customizable high-quality syringe pumps
R is a state-of-the-art statistical computing software with powerful graphic possibilities.
ODIN is a C++ software framework to develop and simulate magnetic resonance sequences.
OpenfMRI.org is a project dedicated to the free and open sharing of raw MRI datasets.
Spinach is software library for simulation of spin dynamics in large spin systems. It supports NMR, EPR, DNP, MAS, PHIP, singlet state NMR and other forms of Magnetic Resonance spectroscopy.
EEZ H24005 is a power supply that provides features of middle and high range commercial devices.
FreeSurfer is a software package for analysis and visualization of structural and functional neuroimaging data
Open-source brain-computer interface (OpenBCI) is an affordable bio-sensing system that can sample electrical activity of human body such as brain (EEG), skeletal muscle (EMG) and heart (ECG) activity.
echOpen: An open source ultrasound probe that can be connected to a smartphone, tablet or PC
The ISMRM Raw Data format is proposed as a common MR raw data format to promote collaborations and reproducible research by facilitating the sharing of data and data processing tools.
gpuNUFFT is an open-source GPU Library for reducing computational time of non-linearly sampled 3D/2D MRI data with direct Matlab interface.
SimpleElastix is a user-friendly command line based program that registers (matches/aligns) images in C++, Python, Java, R, Ruby, Octave, C#, Lua and Tcl.